SUPERFAMILY 1.73 HMM library and genome assignments server

Domain assignment for gi|16131908|ref|NP_418506.1| from Escherichia coli K-12 subMG1655

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|16131908|ref|NP_418506.1|
Domain Number 1 Region: 47-96,132-155,187-297
Classification Level Classification E-value
Superfamily HlyD-like secretion proteins 1.03e-20
Family HlyD-like secretion proteins 0.0032
Further Details:      
 

Protein sequence

External link(s) gi|16131908|ref|NP_418506.1|
Sequence length 343
Comment predicted membrane fusion protein of efflux pump [Escherichia coli str. K-12 substr. MG1655]
Sequence
MESTPKKAPRSKFPALLVVALALVALVFVIWRVDSAPSTNDAYASADTIDVVPEVSGRIV
ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN
ATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAAS
AVSGVDALVAQRAAVEADIALTKLHLEMATVRAPFDGRVISLKTSVGQFASAMRPIFTLI
DTRHWYVIANFRETDLKNIRSGTPATIRLMSDSGKTFEGKVDSIGYGVLPDDGGLVLGGL
PKVSRSINWVRVAQRFPVKIMVDKPDPEMFRIGASAVANLEPQ
Download sequence
Identical sequences B1ITX8 B1XCW7 B3XCK0 B7NG25 P32716
gi|260858192|ref|YP_003232083.1| gi|254164017|ref|YP_003047125.1| gi|238903191|ref|YP_002928987.1| gi|170083536|ref|YP_001732856.1| gi|253775289|ref|YP_003038120.1| gi|89110803|ref|AP_004583.1| gi|218707704|ref|YP_002415223.1| gi|170021919|ref|YP_001726873.1| gi|251787336|ref|YP_003001640.1|

Jump to [ Top of page · Domain architecture · Domain assignment details ]